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• Open terminal

• Go to home directory (cd ~)

• gedit .bashrc

• add these three lines:

  Code Block
  language bash
  export FREESURFER_HOME=/usr/local/freesurfer # Do custom SUBJECTS_DIR first, as FS startup will set to default if missing export SUBJECTS_DIR=/mnt/hgfs/LinuxShare/subjects4freesurfer source $FREESURFER_HOME/SetUpFreeSurfer.sh

• save and restart terminal; test by running “freeview”

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Permissions

brain@ubuntu:~$ sudo chmod -R a+w $SUBJECTS_DIR

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