Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
  • The license file (“license.txt”) is easy to get, so don’t worry if you don’t have an existing license. Just ask follow the link to fill in the form to request another one if you are setting up on a new system.

  • Use the Ubuntu “DEB installer” download

  • Before installing the freesurfer download, install the dependencies (https://surfer.nmr.mgh.harvard.edu/fswiki/BuildRequirements ) .

    • Note: use apt rather than apt-get

    • It is not unusual for these commands to not work as listed. So, go through these steps from a terminal (“#” is for comments):

...

Look for names of packages not installed, and install those. This is a hunt. Make sure you DO NOT run apt --fix-broken install, as this will remove freesurfer (since it’s “broken” meaning not yet installed)

Code Block
sudo apt-get install -y install xorg-dev
sudo apt-get -y install gettext
sudo apt-get -y install csh

...