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Install WSL
Use latest release of Ubuntu
Set default user to be root (make life simpler with permissions): Start PowerShell => C: => ubuntu config --default-user root (details)
Install conda
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wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh bash Miniconda3-latest-Linux-x86_64.sh |
You have to view then agree to terms, then run install responding to various questions
Install ANTs
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conda create -n antsenv -c conda-forge ants -y # create env and install ANTs conda activate antsenv |
Note: all sessions need to start with conda activate antsenv
Create foldersThese folders will be created (no need to create them):
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(antsenv) root@REDWSONFAC26495:~# mkdir ~/rats_mri_project/ (antsenv) root@REDWSONFAC26495:~# cd rats_mri_project/ (antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir template (antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir priors (antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir subjects (antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir outputs |
