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Example: V:\LinuxShare\FSL_FIRST\ID111N1045G2\L_Hipp\MNI\TIVagesex\L_Hipp_vertexMNI_mask.nii (GZ file)
Look at values
Look at the min, max, range using the iamge info tool. This information will be useful for putting in ranges for mricros.
Select the effect size map for significant voxels (example below), and you will see the effect size range (max = 0.55 in example below), and how many significant voxels there are (look for non-zero voxels, so 125 in the example below).
Sorting out the files
The output of randomise are statistic, p value, and corrected p value files, for each contrast. The contrasts to which statistics files correspond are indicated by numbers, e.g., *_tstat1 (or _fstat1), *_tstat2, *_tstat3, and so on. For a two-group design matrix, you will typically have four contrasts; these are listed in the *.con text file created when you create the design matrix with the Glm GUI. Below is an example:
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