Home page for ANTs
Subpages
Child pages | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
|
Install WSL
Use latest release of Ubuntu
Set default user to be root (make life simpler with permissions) - PowerShell => C: => ubuntu config --default-user root (details)
Install conda
Code Block |
---|
wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
bash Miniconda3-latest-Linux-x86_64.sh |
You have to view then agree to terms, then run install responding to various questions
Install ANTs
Code Block |
---|
conda create -n antsenv -c conda-forge ants -y # create env and install ANTs
conda activate antsenv |
Note: all sessions need to start with conda activate antsenv
Create folders
Code Block |
---|
(antsenv) root@REDWSONFAC26495:~# mkdir ~/rats_mri_project/
(antsenv) root@REDWSONFAC26495:~# cd rats_mri_project/
(antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir template
(antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir priors
(antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir subjects
(antsenv) root@REDWSONFAC26495:~/rats_mri_project# mkdir outputs |