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A.study.T1

Field

Description

Example

preproc_folder

U:\HCPpre\T1preprocess\CONTROL\HCP100307\

initnativefolder_study

U:\HCPpre\T1preprocess\CONTROL\HCP100307\T1_initnative_1series\

t1_im

all T1 images

{'U:\HCPpre\T1preprocess\CONTROL\HCP100307\T1w_MPR1E1003070120150127S1\E1003070120150127S01I01.nii'}

t1_native

image in native space

U:\HCPpre\T1preprocess\CONTROL\HCP100307\T1_initnative_1series\E1003070120150127S01I01.nii

t1_base

image in native space (same as t1_native for 2021 onwards)

U:\HCPpre\T1preprocess\CONTROL\HCP100307\T1_initnative_1series\E1003070120150127S01I01.nii

t1

resliced T1 in native space

U:\HCPpre\T1preprocess\CONTROL\HCP100307\T1_ref_vox0.75_bb_min_-90_-126_-72_max_90_90_108\rE1003070120150127S01I01.nii

t1_gm

[same folder as “t1”] …\c1rE1003070120150127S01I01.nii

t1_wm

…\c2rE1003070120150127S01I01.nii

t1_csf

…\c3rE1003070120150127S01I01.nii

t1_rc

5 images (cell array)

…\rc1rE1003070120150127S01I01.nii

…\rc2rE1003070120150127S01I01.nii

…\rc3rE1003070120150127S01I01.nii

…\rc4rE1003070120150127S01I01.nii

…\rc5rE1003070120150127S01I01.nii

t1_seg

segmentation (what is this? not sure)

…\rE1003070120150127S01I01_seg.mat

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