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2) copy the T1 FreeSurfer subject to this folder. An example of a command (from a terminal in Linux):

...]$ cp -rv /mnt/hgfs/LinuxShare/subjects4freesurfer/CON302 /usr/local/freesurfer/subjects/CON302

Note the format of specifying the folder to copy, and the folder to copy into (as opposed to the destination folder); thus in the above example, the destination does not include "CON302".

3) Copy the DTI data to the same subjects folder:

Create the folder if it does not already exist:

...]$ mkdir /usr/local/freesurfer/subjects/CON302/DTI_b0corr

Copy the main data file:

...]$ cp -rv /mnt/hgfs/LinuxShare/subjects4FSL/CON302/DTI_b0corr/data.ni* /usr/local/freesurfer/subjects/CON302

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/DTI_b0corr

Copy bvals4tracula.txt and bvecs4tracula.txt files are included. If not, create them and copy them individually:(see above to create them):

...]$ cp /mnt/hgfs/LinuxShare/subjects4FSL/CON302/DTI_b0corr/*4tracula.txt /usr/local/freesurfer/subjects/CON302/DTI_b0corr

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