Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
  1. Transfer MRI scans from BMC database to T Drive under correct subject folder


  2. Access CSPM from the SPM12 toolbox drop down menu and Select the DICOM rename/convert option on from the top left hand corner
  3. Under the CSPM window follow the steps outlined below:
    1. Trace the Dicom path from the T-Drive and paste it to the "Folder where DICOM files are located" box
    2. Select Subfolders Only- : The dicom files from the BMC are categorized by subfolders therefore you must select this option so that the program creates the proper series using these files
    3. Specify the correct Patient ID: Subject's 4 digit code/followed by their study #/date ex: 32760320160810. This will label each of the converted files with the correct Subject ID.
      1. This is also the same identifier that is written at the top of the Subject Information sheet
    4. Select Convert
      1. The conversion process will take about 20-30 minutes to complete.


  4. When the conversion is complete, create a new folder under the Subject's MRI Study folder
    1. Label the new folder: raw
    2. Copy all of the Dicom files into this folders separating making sure not to include the Seriesfrom this folder as well



  5.  You are now ready to outline the MRI scans on Matlab. Follow the steps outlined here

...