There are two many programs that do this . The first but most are obsolete.
As of June 2022: Bruker Conversion - MP3 (June 2022)
One is an SPM extension that runs in MATLAB, and the second is a python program. Since the python program is being updated, it’s the better option. It does require installing python (see Python for MTLAB ).
The python program can select the toltop-level folder for one subject and convert all the scans within.
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To install
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Open a Command Prompt
pip install bruker2nifti
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To run:
This If you added the python path when installing python, go to a command window and the the package name (bruker2nitfi).
To run the GUI, use bruker2nifti_gui
Otherwise….this is obtuse….
Navigate to and run the python file “open” in the following subfolder (see note below)
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To find the python home folder, in matlab type >> pyenv
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To check version
Open Command Prompt
Type pip show bruker2nifti
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