Intro
After initial testing, we've decided the following:
- Cardiac harmonics: 1 (default)
- Respiraatory harmonics: 1 (default)
- Overall transition probability: 0 (default)
- Markov chain transition probability: 0.01 (default)
What we are now looking at is cardiac and respiraotry separately, and respiratory frequencies 8-25 br/min (as opposed to the initial 6-35 br/min).
Results
| VOI | N | * Cardiac, Respiratory harmonics | ? **Overall transition probability | ? ***Markov chain transition probability | fMRI-thermode | rsfMRI | Valsalva | fMRI-Tonic Pain |
|---|---|---|---|---|---|---|---|---|
| Brainstem | raw | 0 (try up to 0.01) | 0.01 (try up to 0.05) |
|
|
|
| |
| 1 | 1,1 (default) |
|
|
|
| |||
| 2 | 3,4 (as in paper) |
|
|  |
| |||
| 3 | 1,4 |
|
|
| ||||
| 4 | 3,1 |
|
|
| ||||
| 5 | 2,2 |
|
|
| ||||
| 6 | 1,1 | 0.01 | 0.05 |
|
|
| ||
| raw |  |  |  | |||||
| 7 | 1,1 | 0 | 0.05 |
|
|
| ||
| 8 | 1,1 | 0.01 | 0.01 |
|
|
| ||
| BRAINSTEM ABOVE / CORTICAL BELOW | ||||||||
| Cortical | raw | 0 (try up to 0.01) | 0.01 (try up to 0.05) |
|
|
|
| |
| 1 | 1,1 (default) |
|
|
|
| |||
| 2 | 3,4 (as in paper) |
|
|
|
| |||
| 3 | 1,4 |
|
|
| ||||
| 4 | 3.1 |
|
|
| ||||
| 5 | 2,2 |
|
|
| ||||
| 6 | 1,1 | 0.01 | 0.05 |
|
|
| ||
| 7 | 1,1 | 0 | 0.05 |
|
|
| ||
| 8 | 1,1 | 0.01 | 0.01 |
|
|
| ||
| Limbic (insula?) | raw | 0 (try up to 0.01) | 0.01 (try up to 0.05) |
|
|
|
| |
| 1 | 1,1 (default) |
|
|
|
| |||
| 2 | 3,4 (as in paper) |
|
|
|
| |||
| 3 | 1,4 |
|
|
| ||||
| 4 | 3,1 |
|
|
| ||||
| 5 | 2,2 |
|
|
| ||||
| 6 | 1,1 | 0.01 | 0.05 |
|
|
| ||
| 7 | 1,1 | 0 | 0.05 |
|
|
| ||
| 8 | 1,1 | 0.01 | 0.01 |
|
|
| ||
| Global | raw | 0 (try up to 0.01) | 0.01 (try up to 0.05) |
|
|
|
| |
| 1 | 1,1 (default) |
|
|  |
| |||
| 2 | 3,4 (as in paper) |
|
|
|
| |||
| 3 | 1,4 |
|  |
| ||||
| 4 | 3,1 |
|
|
| ||||
| 5 | 2,2 |
|
|
| ||||
| 6 | 1,1 | 0.01 | 0.05 |
|  |
| ||
| 7 | 1,1 | 0 | 0.05 |
|  |
| ||
| 8 | 1,1 | 0.01 | 0.01 |
|
|
| ||
| global | ||||||||
| raw | |  | ||||||
| 1,1 (default) | default (0) | default (0.01) |  | |||||
| Sophie testing resting state | cardiac only (1, nothing) | default (0) | default (0.01) |  | ||||
| resp only (nothing, 1) | default (0) | default (0.01) |  | |||||
| cardiac only (1, nothing) | 0.01 | 0.05 |  | |||||
| cardiac only (1, nothing) | 0.01 | 0.01 |  | |||||
| default (0.01) | ||||||||
| resp only (nothing, 1) | 0.01 | 0.05 |  | |||||
| resp only (nothing, 1) | 0.01 | 0.01 |  | |||||
| raw |  | | ||||||
| drifter 1 | 1,1 (default) resp rate: 6-35 (original) |  | | |||||
1,1 (default) resp rate: 8- 25 |
|
|
| |||||
resp only (nothing, 1) resp rate: 8- 25 | default (0, 0.01) | default (0.01) |
|
|
|
* Number of periodics (default 1): The total number of periodics (fundamental + harmonics) that are estimated from the fMRI data.
** Overall transition probability (default 0): Transition probability between all steps of frequencies (i.e. the probability of a jump from e.g. 70 bpm to 80 bpm).
*** Markov chain transition probability (default 0.01): Transition probability between consecutive steps of frequencies (i.e. the probability of a jump from e.g. 70 bpm to 71 bpm).