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- Folder where raw files are located.
- Option in case study data comes pre-separated into a parent folder with subfolders for each series.
- For multiple DTI series, creates a folder with all DTI series combined.
- Adjust the tensors by the amount the nifti image was shifted from the DICOM.
- Reader gradients from the DICOM headers (some Siemens scanners; beware of early versions).
- Rename the files with either the patient ID (as in the raw files) or specify the ID.
- Turn on to display more messages; may be useful for debugging.