MRI scans completed at the BMC in 2017 with our new protocol should be documented in MATLAB as follows:
MRI Sequences
| Order | Type/Protocol | Details | Series |
|---|---|---|---|
| 1 | T1 | T1w MPR | Record 2nd series (raw folder) |
| 2 | T1 | T1w MPR | Record 4th series *if available* (raw folder) |
| 3 | pd+T2 | T2pd | Record only series (raw folder) |
| 4 | Spin Echo Field Map | HCP Spin Echo Field Map | Record 2nd series (raw folder) or only series (as applicable) should have 3 nifti files |
| 5 | fMRI | rfMRI REST AP | Record 2nd series (raw folder) |
| 6 | DTI | DWI 98dir AP | Record 2nd series (raw folder) |
| DTI | DWI 99dir AP | Record 2nd series (raw folder) | |
| 7 | tgse_pcasl | ASL | Record 2nd series (raw folder) |
| 8 | Handgrip | HandGrip AP | Record 2nd series (raw folder) |
| 9 | Valsalva | Valsalva AP | Record 2nd series (raw folder) |
| 10 | Insp. Loading | InspLoading AP | Record 2nd series (raw folder) |
| 11 | Breathhold | BreathHold AP | Record 2nd series (raw folder) |
| 12 | Stroop | Stroop AP | Record 2nd series (raw folder) |
| 13 | T2 | T2w SPC | Record 2nd series (raw folder) |
| 14 | HiResHP | TSE HiResHp | Record 2nd series (raw folder) |
| 15 | Field Mapping | Field Mapping GRE | Record only series (raw folder) |
| 16 | Field Mapping_phase | Field Mapping GRE phase | Record only series (raw folder) |