Network file server
There are three top-level folders, Subject Data, Analysis, and LinuxShare.
Subject Data
This folder contains the raw data. What is here cannot be replicated, in contrast to the Analysis folder.
Z:\Subject Data contains project folders. The main one with Subject_100,... etc is
Z:\Subject Data\Luke
Others that you will likely use are
Z:\Subject Data\HCP
Z:\Subject Data\IXI
Z:\Subject Data\OASIS
Each project folder has subfolders for each subject. They are not organized into Control/Patient.
Analysis
Analysis contains two subfolders, Preprocess and Set. The Preprocess folder has subfolders for each project, and the Project Configuration should use these. Examples could be:
Z:\Analysis\Preprocess\OSA2013
Z:\Analysis\Preprocess\Migraine
Z:\Analysis\Preprocess\Melbourne2016
The Set folder contains many analyses, so each person should create their old subfolder. Here are some examples:
Z:\Analysis\Zeynab\PainfMRI
Z:\Analysis\Noemi\SUIT
LinuxShare
This folder is only for "sharing" with Linux. There is no MATLAB preprocessing, subject data, or sets here. There will be FreeSurfer and FSL processed data.